Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACATGTGCCCAGGTC
(((((((((...((((((((..&))))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308313
GeneSymbolROPN1B
Binding site253,272
Score0.923
Seed1
Au0.515
Energy-19.3
Binding len19
Me-11.352
Phylopstem0.82304367
Phylopflank1.3492861412500001
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure