Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAAAGGAGCTT
....((((((((..((((((..&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308316
GeneSymbolTSPAN2
Binding site560,575
Score1.0
Seed0
Au0.529
Energy-20.9
Binding len15
Me-11.693
Phylopstem1.006875425
Phylopflank0.03969815000000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure