Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGTACATTGTGGGACCAGT
..(((((.(((((((((.(((.&))).))))))))).).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308334
GeneSymbolRPGRIP1L
Binding site5401,5422
Score1.0
Seed0
Au0.662
Energy-18.4
Binding len21
Me-7.271
Phylopstem4.206613555555555
Phylopflank2.9281277487500006
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure