Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGACCAGGC
.(((((....(((((((((...&))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308350
GeneSymbolSIDT1
Binding site4235,4251
Score0.846
Seed0
Au0.485
Energy-18.3
Binding len16
Me-9.95
Phylopstem0.14946144444444442
Phylopflank-0.051325074375000015
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure