Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCGGAGTGAGCCCAGTGA
(((((((((..(((((((((..&))))))))).))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308363
GeneSymbolMAP1S
Binding site2856,2877
Score1.0
Seed1
Au0.324
Energy-27.6
Binding len21
Me-8.005
Phylopstem0.5974115555555556
Phylopflank0.705640125
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure