Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATGCAGAGAACCGAAACCCCAGCTGCGAGGTCCACCAGGAGCCGGTGA
(((((((((((..(((((....&.)))))..............))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047426235
GeneSymbolCACHD1
Binding site2890,2938
Score0.923
Seed1
Au0.397
Energy-26.5
Binding len32
Me-8.574
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure