Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACTTAGATGTTGGAGGAGCTGGTT
.((((((((((((((((((((.&))))))))).....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047426235
GeneSymbolCACHD1
Binding site2252,2278
Score0.923
Seed1
Au0.588
Energy-24.2
Binding len26
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure