Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACCAATGCAGAGAACCGAAACCCCAGCTGCGAG
(((((((((.((((....(((&.)))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426235
GeneSymbolCACHD1
Binding site2881,2919
Score1.0
Seed1
Au0.412
Energy-23.4
Binding len21
Me-6.149
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure