Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGATACCACAGTTGCT
..(((((((.(((....((((&))))....))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426235
GeneSymbolCACHD1
Binding site4211,4231
Score0.923
Seed1
Au0.559
Energy-20.8
Binding len20
Me-8.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure