Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTCAGCCGGGGTCGATGTGGG
((((((((.(((((((((((.&))))).)))))).)))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426235
GeneSymbolCACHD1
Binding site3571,3596
Score0.846
Seed1
Au0.485
Energy-20.3
Binding len25
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure