Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGACAGAACAGTATTGGAAATACCCCCAGTGGGCCAGTT
.((((((((((.((((((.(((&))))))))).))........................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001310121
GeneSymbolATXN2
Binding site1441,1486
Score0.846
Seed1
Au0.515
Energy-22.9
Binding len45
Me-7.14
Phylopstem5.376231852941178
Phylopflank5.0977355625
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure