Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTAGGTCTTAGGTACATCCTAAAGGGAGCACAGA
..(((((((((((..((((...&.))))..)))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001310134
GeneSymbolPRAMEF25
Binding site1646,1682
Score0.846
Seed1
Au0.544
Energy-21.3
Binding len20
Me-6.549
Phylopstem-0.27299333333333337
Phylopflank-0.39959267625
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure