Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGGAGCACCCAGCCTTGGACTTTTAGCATAGTGTGTCAGGTC
(((((((((((.((((......&.)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001310137
GeneSymbolNPIPB11
Binding site1688,1734
Score0.974
Seed1
Au0.485
Energy-20.9
Binding len18
Me-7.284
Phylopstem-0.4504371363636363
Phylopflank-0.6124056737499997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure