Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACTTCGGTGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001310160
GeneSymbolPAX6
Binding site2083,2098
Score0.846
Seed1
Au0.368
Energy-15.8
Binding len10
Me-14.322
Phylopstem-0.16390642499999997
Phylopflank0.01628903999999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure