Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAGCAACAGGAAGGAGGGGGAGAGAATACCAACTCCATCAGTT
.((((((((((((((((((((.&))))).....)))))))))).....................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001310160
GeneSymbolPAX6
Binding site2115,2162
Score0.846
Seed1
Au0.515
Energy-21.5
Binding len47
Me-3.793
Phylopstem2.5200481913043475
Phylopflank3.048637365000001
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure