Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGCCAAATTTGAAGTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGGC
.(((((((((((.(((((....&.))))).)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001311200
GeneSymbolCLNS1A
Binding site325,379
Score1.0
Seed1
Au0.485
Energy-21.0
Binding len23
Me-5.082
Phylopstem0.6895703066666665
Phylopflank0.4552016525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure