Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCCTGAGGAGTGGGCAGAAGAAGGAGGTAGTGT
(((((.((((((((((((((((&))))))).............))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001312673
GeneSymbolPCYT1A
Binding site1571,1609
Score0.846
Seed0
Au0.485
Energy-22.6
Binding len38
Me-5.839
Phylopstem-0.1360410903225807
Phylopflank-0.07826197749999995
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end8
Position3UTR
2D Structure