Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGTACTTCACAAACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAA
...((((.(((((((((((...&.))))))))).))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001312692
GeneSymbolTRIT1
Binding site256,307
Score0.923
Seed0
Au0.456
Energy-23.1
Binding len20
Me-8.828
Phylopstem0.9440000000000001
Phylopflank0.5568125
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure