Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CGGGGAGGGGCGCGGC
..((((((((((((((......&))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001312872
GeneSymbolCOX20
Binding site159,175
Score0.846
Seed1
Au0.147
Energy-20.5
Binding len16
Me-4.957
Phylopstem-0.33813166666666666
Phylopflank0.3372630187499998
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end2
Position5UTR
2D Structure