Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACCACACATGGAGCAAAGTTCCCTGGACCCAGGAAAAGAGGGCCGGG
..(((((((((((((((((...&.))))))))..)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001312920
GeneSymbolMSANTD2
Binding site2061,2112
Score0.846
Seed1
Au0.426
Energy-25.5
Binding len22
Me-4.957
Phylopstem1.60486665
Phylopflank1.5940270971250001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure