Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&TGTGTACCCGAGGGGTAATGATT
.((((((((((((((((((((&))))))))..)))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001313893
GeneSymbolHMGB1
Binding site4163,4186
Score0.923
Seed1
Au0.603
Energy-19.1
Binding len23
Me-3.793
Phylopstem0.5448222909090908
Phylopflank0.10566006850000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure