Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACAGGAGAGGCCGGGCGCAGTGG
(((((((((((((((..((((.&)))).)))))))...))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001313893
GeneSymbolHMGB1
Binding site4307,4332
Score0.846
Seed1
Au0.456
Energy-23.6
Binding len25
Me-4.171
Phylopstem-0.0528480842105263
Phylopflank-0.054754810500000015
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure