Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGGAGGCTGAGGCAGG
..(((.(((((((((((((...&))))))))))..))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001313893
GeneSymbolHMGB1
Binding site4487,4507
Score0.846
Seed0
Au0.353
Energy-21.4
Binding len20
Me-6.858
Phylopstem0.4151791013333333
Phylopflank0.41622906525000003
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure