Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGGGCAGGTTCACGGACCAGCCTGCAGGGGGAAAGGGAGCCAGG
..((((((((((((((((((((&)))))))))).............................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001313959
GeneSymbolAFF1
Binding site1970,2020
Score0.846
Seed1
Au0.368
Energy-31.0
Binding len50
Me-4.957
Phylopstem1.8239763714285713
Phylopflank1.6151198475
Longest consecutive pairings10
Position of longest consecutive pairings40
Pairings in 3prime end8
PositionCDS
2D Structure