Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGGAAGGGGAGCCGCCAGA
..((((((((((((((((.((.&))))))))))))).....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001313959
GeneSymbolAFF1
Binding site2463,2487
Score0.846
Seed1
Au0.353
Energy-25.9
Binding len24
Me-4.957
Phylopstem0.47230328095238083
Phylopflank0.6139361949999999
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure