Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTGGTGCCAAGGA
.((((((((.(((.((((....&))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001313982
GeneSymbolCDK11A
Binding site1889,1906
Score0.923
Seed1
Au0.368
Energy-16.6
Binding len17
Me-5.893
Phylopstem2.52301
Phylopflank1.7536541112500001
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure