Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGGGACATCTGTGTGCCTGGG
.((.((((((((((((......&.)))).)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001314018
GeneSymbolCPNE5
Binding site1137,1160
Score0.846
Seed0
Au0.338
Energy-19.0
Binding len18
Me-6.825
Phylopstem-0.9260355923076922
Phylopflank-0.28834830749999985
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure