Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGCCTTTGGGACATCTGTGTGCCTGGGAGGCTGCCAGG
..(((((..(((((((((((.(&.).)))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001314018
GeneSymbolCPNE5
Binding site1127,1171
Score0.846
Seed0
Au0.353
Energy-24.7
Binding len22
Me-8.327
Phylopstem-0.17661840000000004
Phylopflank-0.35652513750000014
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure