Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGGGACATCTGTGTGCCTGGG
.((.((((((((((((......&.)))).)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001314019
GeneSymbolCPNE5
Binding site1178,1201
Score1.0
Seed0
Au0.338
Energy-19.0
Binding len18
Me-6.825
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure