Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGCTGTGAGCTGCCTGCAGCCAGAAGGAGATGAGGTGGACTGGGTCCAGTGT
((((((((((((((((((((((&)))))))))....................)))))))................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001314042
GeneSymbolKDM5B
Binding site4680,4739
Score0.846
Seed1
Au0.456
Energy-27.1
Binding len59
Me-3.938
Phylopstem4.493473612068966
Phylopflank3.32984020125
Longest consecutive pairings9
Position of longest consecutive pairings50
Pairings in 3prime end8
PositionCDS
2D Structure