Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGACGGAGAAGGGGCCATGTT
.((((((((((((((((((...&))))))).....))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001316321
GeneSymbolCCDC57
Binding site4651,4676
Score0.923
Seed1
Au0.397
Energy-26.1
Binding len25
Me-3.793
Phylopstem0.3976536333333332
Phylopflank0.07901881250000015
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure