Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGAGGAAGTGCACAGGGGTCC
.(((((((((.((((((((((&)))))).))))...))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001316321
GeneSymbolCCDC57
Binding site5965,5992
Score0.846
Seed1
Au0.382
Energy-27.6
Binding len27
Me-6.618
Phylopstem0.822486
Phylopflank1.2939553462500002
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure