Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCGGGTC
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001316323
GeneSymbolPOLR2E
Binding site785,795
Score1.0
Seed1
Au0.294
Energy-14.9
Binding len10
Me-14.466
Phylopstem-0.07858144444444444
Phylopflank-0.15517804999999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure