Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAAGTGGAGGATCGCTTGAGCTCAGG
..(((((((((((((((((...&)))))))))).............)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001316323
GeneSymbolPOLR2E
Binding site2002,2034
Score1.0
Seed1
Au0.456
Energy-22.9
Binding len32
Me-4.957
Phylopstem-0.539129064516129
Phylopflank-0.7952982050000001
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end5
Position3UTR
2D Structure