Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTACCCAGGAGGTGGAGGTTGCAGTGA
(((((.((((((((((((((.(&).))))))))))..))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001316361
GeneSymbolBCAS1
Binding site2201,2229
Score0.846
Seed0
Au0.412
Energy-24.1
Binding len28
Me-5.839
Phylopstem-0.45577218124999996
Phylopflank0.25215025874999986
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure