Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((.(((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001316897
GeneSymbolSPACA9
Binding site1655,1678
Score0.846
Seed1
Au0.426
Energy-27.1
Binding len23
Me-10.109
Phylopstem-0.6005454545454545
Phylopflank0.013362499999999987
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure