Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTTTCTCAACTGTCCCAAGGAGGGGGCCT
....(((((((((((((((((.&.))).)))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317075
GeneSymbolBLCAP
Binding site1240,1273
Score0.987
Seed0
Au0.412
Energy-26.1
Binding len21
Me-9.547
Phylopstem0.6533162631578947
Phylopflank1.2373640174999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure