Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTACCCGGCTACTTAGGTATGCTTAGGGGAGCTGGTGG
((((((((((((((((((((.(&).)))))))................))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317135
GeneSymbolPFKFB4
Binding site2126,2165
Score0.815
Seed1
Au0.382
Energy-27.7
Binding len39
Me-3.938
Phylopstem3.556207327777778
Phylopflank4.251852737500001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure