Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGAACGGGCTTGCAAGTAGCTTGCCAGCTGA
((((((((((.(((((((((((&))))))))))).)))..............))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317158
GeneSymbolPLAGL1
Binding site1366,1404
Score1.0
Seed1
Au0.397
Energy-27.8
Binding len38
Me-6.762
Phylopstem2.895940454545454
Phylopflank1.47768392375
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure