Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGCCCAGGCCTGGGATGCAGTGA
(((((..((((.(((((((...&.)))))))...))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317184
GeneSymbolCDH1
Binding site3389,3413
Score0.846
Seed0
Au0.471
Energy-24.4
Binding len23
Me-10.729
Phylopstem-0.39540785714285714
Phylopflank0.22044566875
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure