Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTTTTTATACTGAGTGTGCCTAGGTT
(((((((((((((((((((...&))))))))..........))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001317195
GeneSymbolCDH3
Binding site3164,3195
Score0.923
Seed1
Au0.574
Energy-21.2
Binding len31
Me-3.938
Phylopstem0.6946039366666668
Phylopflank0.3782811162499997
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end5
Position3UTR
2D Structure