Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGGCCATTCCAAATGCTGCTGCAGCAGCTGCTGCAGCTGCT
..(((((((((((.((.....&.)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426538
GeneSymbolPTBP2
Binding site1044,1089
Score1.0
Seed1
Au0.382
Energy-23.6
Binding len16
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure