Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGACAGTGCCAGTGC
(((((((((((((((((((...&)))))))))).)).......................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317237
GeneSymbolCTSB
Binding site3180,3224
Score0.846
Seed1
Au0.353
Energy-24.2
Binding len44
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end5
Position3UTR
2D Structure