Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAATGTAGTCAGC
..(((((.((((.((((((...&)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001317382
GeneSymbolHSPA4L
Binding site4110,4127
Score0.846
Seed0
Au0.618
Energy-17.0
Binding len17
Me-8.56
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure