Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCGGGAGGCTCAGGCAGGAGAATCGCTGGAACCCAGGAGGCAGA
..(((.(((((((((((((((.&))))))))))............................))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317382
GeneSymbolHSPA4L
Binding site5286,5334
Score1.0
Seed0
Au0.382
Energy-26.0
Binding len48
Me-6.858
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure