Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGAATGTAGATGTCAAAATGTAATTAGAGGCCCCGTGCAGTGG
((((((((.(((((((((((((&))))))))))).....................)).))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317382
GeneSymbolHSPA4L
Binding site8966,9016
Score1.0
Seed1
Au0.5
Energy-23.3
Binding len50
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings39
Pairings in 3prime end8
Position3UTR
2D Structure