Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCATTCAAAAAACACATGTTGAGCACATATTGTGTGCCGGGC
.(((((((((((((((......&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001317406
GeneSymbolSLC6A11
Binding site5534,5578
Score0.923
Seed1
Au0.588
Energy-24.0
Binding len17
Me-3.793
Phylopstem-0.17686195999999998
Phylopflank-0.04881197250000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure