Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCAGGAGTGGGACTCGGGGGTAAGTGA
((((.((((((((((((((((.&)))))))))).........)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317406
GeneSymbolSLC6A11
Binding site8852,8883
Score0.923
Seed0
Au0.529
Energy-25.2
Binding len31
Me-8.057
Phylopstem-0.212707176
Phylopflank0.042476198750000006
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure