Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTACCCCCTTGGAGCTCAGTGT
((((((((((.....(((((((&))).))))....))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317406
GeneSymbolSLC6A11
Binding site6266,6290
Score0.846
Seed1
Au0.618
Energy-23.6
Binding len24
Me-12.991
Phylopstem-0.13307479090909083
Phylopflank-0.0016319425000000248
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure