Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAGAAGGCGCTGCCCCTGGGCAATGGGAAGGCTGCTGAGGAGGCGCGGGAGTCC
.((((((((((((((((((..&.))))))))))))...........))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001317406
GeneSymbolSLC6A11
Binding site46,101
Score0.846
Seed1
Au0.25
Energy-29.4
Binding len32
Me-3.793
Phylopstem3.0862996866666665
Phylopflank1.357332529898649
Longest consecutive pairings12
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure